- Introduction
- Supported Distributions
- Prerequisites
- Getting the code
- Dependencies and building MAUS
- Other useful libraries/applications
Introduction¶
This page will take you through getting the prerequisites of installing MAUS and ensuring that it's working.
If you have issue, please file a new support ticket by clicking "new issue" above. Below are some common known problems:
DO NOT HAVE WHITESPACE IN DIRECTORY NAME: various third_party packages will break. This is beyond the scope of MAUS. See issue #306.
RAL-ONLY NOTE: please run export http_proxy=wwwcache.rl.ac.uk:8080 (or equivalent) to setup the RAL proxy
Supported Distributions¶
We support recent versions of- Scientific Linux
- CENT OS
Other Linux distributions are supported on a "best effort" basis.
Prerequisites¶
Most installation problems are a result of people not reading this section
You will need a few GBs of free space on your harddrive for Geant4 and ROOT (which will be installed along with MAUS).
Scientific Linux/Redhat/Fedora/Centos¶
To install the tools required to build software on Scientific Linux, you must run the following commands:
sudo yum groupinstall "Development Tools" sudo yum groupinstall "Development Libraries" sudo yum install wget libX11-devel libXft-devel libXext-devel libXpm-devel libX11-devel libpng-devel tcl-devel tkinter
where the sudo command means that this is run as the root superuser. If you do not have this access, you must ask your system manager.
Scientific Linux 4.8 only. Please also run:
sudo yum install xorg-x11-devel
Please return to the beginning of this section and repeat the test.
Debian or Ubuntu¶
To install the tools required to build software on Debian-based systems, you must run the following commands:
sudo apt-get install build-essential xorg-dev automake autoconf libtool scons zlibc libssl-dev libblas-dev liblapack-dev libpng-dev
where the sudo command means that this is run as the root superuser. If you do not have this access, you must ask your system manager.
RAL ONLY. For RAL people, you need to create a file called /etc/apt/apt.conf and fill it with:
ACQUIRE { http::proxy "http://wwwcache.rl.ac.uk:8080/"; }
When it installed then please return to the beginning of this section and repeat the test.
OpenSUSE¶
To install the required tools, you must run the following command:
sudo zypper install -t pattern devel_C_C++
where the sudo command means that this is run as the root superuser. If you do not have this access, you must ask your system manager. Please return to the beginning of this section and repeat the test.
Other distribution¶
Please try using google to find out how to do it for your specific architecture. If you succeed, then please post those instruction here and continue with these instructions. If you fail, please email the user mailing list (maus-user@jiscmail.ac.uk).
Getting the code¶
There are three options for obtaining code.
Using a packaged tarball¶
Click on the Files tab above and download the file maus-latest-release.tar.gz. Or you could choose to download an earlier release if you choose. Upon downloading the file (I'm going to assume you're using the latest, but just change the filename if you aren't), then run:
tar xvfz maus-latest-release.tar.gz
to extract the code. You should now have a directory called 'maus-latest-release'.
Bazaar repository (recommended for developers)¶
The following command checks out the current source tree for MAUS that is under development. This code branch contains the biweekly stable release.
Bazaar (bzr) is the program we use to maintain the repository. There is a MAUS-specific tutorial of using bzr here. Please branch MAUS. The code is hosted on launchpad under the MAUS project. To get the code, you must then run:
bzr branch lp:maus
and you should now have a directory called 'maus'. If you get a 'command not found', you must install bazaar. If you run into connectivity issues, you can check the bazaar server status here.
If you want to publish results based on MAUS, please use a release version of the code.
Dependencies and building MAUS¶
MAUS will try to help you by installing all of its dependencies for you.
Please enter the MAUS directory that you just created in the previous section.
*Be careful about using symbolic links to move to this directory prior to installation, as this may confuse the build system. Always try to follow an absolute path instead. *
You can now run the following command to build all your dependencies, build MAUS, and run the tests for you (this takes about 1 hour for most machines, and 3 hours for VMs!):
./install_build_test.bash
where the commands it executes are in repository version
Some of the tests check that errors are handled correctly, so we expect some error messages. The tests should end with a line like:
Ran 79 tests in 251.375s OK (SKIP=20)
Sometimes the test script may skip some tests because a certain library was not available. A test failure looks like
Ran 79 tests in 251.375s FAILED (errors=1, failures=1)
If you run into issues, please send the output of:
bash run_tests.bash
to us through an issue by clicking 'New Issue' above.
If you are installing multiple copies of maus on the same machine, it is possible to set them to all use the same set of third party libraries, cutting down the installation time to approximately 10 minutes for each extra installation. After setting up the first installation as above, use same command as before but add an argument specifying the root directory of the first maus installation:
./install_build_test.bash /path/to/original/maus
NB: Make sure that you only do this for installations that use the same version of the third party libraries.
Make to do this in a fresh terminal so that all of your environment variables are reset. (Otherwise the installer may get confused)
You are now ready to run MAUS!
Troubleshooting¶
- I get an error about Python versions when I run ./configure: this is normal - you need to install third party libraries (including python 2.7) by doing
bash ${MAUS_ROOT_DIR}/third_party/build_all.bash - I get errors in the test output: this is normal - if the tests finish with a line like OK, then the tests passed. If the tests finish with a line like FAILED (errors=1, failures=1) (or worse a segmentation fault), then the tests failed. Some of the tests are actually checking that errors are produced on bad input.
- I am at RAL and I get an error like -bash: nosetests: command not found - before you run the build, you need to setup the proxy. Make sure to do
export http_proxy=wwwcache.rl.ac.uk:8080
before you build. - MAUS does not import - are you using a symbolic link? See #770
Other useful libraries/applications¶
MAUS doesn't require these libraries to build or run, but they may provide useful functionality for documentation, installation, etc
Documentation¶
To build the documentation, you will need
- doxygen automatic code documentation tool website
- latex typesetting tool website
- latex2html for making html documents website
- graphviz (dot) for making class layouts, etc website documentation
Other Stuff¶
- lcov C++ code coverage tool (activated by maus_lcov environment variable)